diff --git a/ancillaries/ncbi-taxonomy-prefix/dsmz-match/bacdive-to-taxid.txt b/ancillaries/ncbi-taxonomy-prefix/dsmz-match/bacdive-to-taxid.txt
new file mode 100644
index 0000000000000000000000000000000000000000..ed63d7d612dd11fa2acdd71d62f68d872123340c
--- /dev/null
+++ b/ancillaries/ncbi-taxonomy-prefix/dsmz-match/bacdive-to-taxid.txt
@@ -0,0 +1,81741 @@
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diff --git a/process_DSMZ_corpus.snakefile b/process_DSMZ_corpus.snakefile
index eb74fe1ae8f7745232b5ff0909fdf9ae87d5eeb6..d1548501d63fb81b44db9700e3dcfc0e0a6c9a89 100644
--- a/process_DSMZ_corpus.snakefile
+++ b/process_DSMZ_corpus.snakefile
@@ -11,16 +11,6 @@ rule all:
 		'corpora/florilege/dsmz/dsmz-results.txt'
 		
 
-'''
-get taxa /!\ need gawk to be installed
-'''
-rule get_dsmz_taxa:
-	input:
-		file='corpora/dsmz/dsmz-data/category=from_ncbi_taxonomy-key=taxid.tsv'
-	output:
-		taxa='corpora/dsmz/taxids.txt'
-	shell: """cut -f4 {input.file} |sort -u > {output.taxa}"""
-
 '''
 get habitats
 '''
@@ -31,25 +21,6 @@ rule get_dsmz_habitat:
 		habitats='corpora/dsmz/habitats.txt'
 	shell: """cut -f4 {input.file} |sort -u > {output.habitats}"""
 
-'''
-map taxid
-'''
-rule map_dsmz_taxid:
-	input:
-		taxids='corpora/dsmz/taxids.txt'
-	output:
-		mapped_taxids='corpora/dsmz/mapped_taxids.txt'
-	params:
-		taxa_id_full='ancillaries/ncbi-taxonomy-prefix/taxa+id_full.txt',
-		plan='plans/map_taxid.plan'
-	singularity:config["SINGULARITY_IMG"]
-	shell: """alvisnlp -J-Xmx32g -cleanTmp -verbose \
-	-alias input {input.taxids} \
-	-alias taxa+id_full {params.taxa_id_full} \
-	-alias output {output.mapped_taxids} \
-	{params.plan}
-	"""
-
 
 '''
 map habitats of microorganisms
@@ -80,13 +51,14 @@ format results
 '''
 rule format_dsmz_results:
 	input:
-		taxa_file='corpora/dsmz/dsmz-data/category=from_ncbi_taxonomy-key=taxid.tsv',
 		habitats_file='corpora/dsmz/dsmz-data/category=origin-key=sample_type.tsv',
-		taxa='corpora/dsmz/mapped_taxids.txt',
 		habitats='corpora/dsmz/mapped_habitats.txt'
 	output:
 		result='corpora/florilege/dsmz/dsmz-results.txt'
+	params:
+		taxa_id_full='ancillaries/ncbi-taxonomy-prefix/taxa+id_full.txt',
+		bacdive_taxid='ancillaries/ncbi-taxonomy-prefix/dsmz-match/bacdive-to-taxid.txt',
 	conda: 'softwares/envs/obo-utils-env.yaml'
-	shell: 'python softwares/Florilege/scripts/format-dsmz-results.py --dsmz-taxa {input.taxa_file} --dsmz-habitats {input.habitats_file} --mapped-taxa {input.taxa} --mapped-habitats {input.habitats} > {output.result}'
+	shell: 'python softwares/Florilege/scripts/format-dsmz-results.py --bacdive-taxid {params.bacdive_taxid} --taxonomy {params.taxa_id_full} --dsmz-habitats {input.habitats_file} --mapped-habitats {input.habitats} > {output.result}'
 
 
diff --git a/softwares/Florilege/scripts/format-dsmz-results.py b/softwares/Florilege/scripts/format-dsmz-results.py
index 9a7eede25ecb95ae4f4798e23d005aa904896972..44e5ba54415b301a52e6878dad396641c4cda03a 100644
--- a/softwares/Florilege/scripts/format-dsmz-results.py
+++ b/softwares/Florilege/scripts/format-dsmz-results.py
@@ -2,15 +2,15 @@ import re
 import argparse
 
 parser = argparse.ArgumentParser()
-parser.add_argument('--dsmz-taxa', action='store', default='florilege-BD/dsmz/dsmz-data/category=strains_tax_PNU-key=species.tsv', help='DSMZ taxa file')
-parser.add_argument('--dsmz-habitats', action='store', default='florilege-BD/dsmz/dsmz-data/category=origin-key=sample_type.tsv', help='DSMZ habitat file')
-parser.add_argument('--mapped-taxa', action='store', default='florilege-BD/dsmz/mapped_species.txt', help='mapped taxa file')
-parser.add_argument('--mapped-habitats', action='store', default='florilege-BD/dsmz/mapped_sample_types.txt', help='mapped habitat file')
+parser.add_argument('--bacdive-taxid', action='store', default='ancillaries/ncbi-taxonomy-prefix/dsmz-match/bacdive-to-taxid.txt', help='Bacdive id to taxid mapping file')
+parser.add_argument('--dsmz-habitats', action='store', default='corpora/dsmz/dsmz-data/category=origin-key=sample_type.tsv', help='DSMZ habitat file')
+parser.add_argument('--taxonomy', action='store', default='ancillaries/ncbi-taxonomy-prefix/taxa+id_full.txt', help='taxonomy file')
+parser.add_argument('--mapped-habitats', action='store', default='corpora/dsmz/mapped_habitats.txt', help='mapped habitat file')
 
 args = parser.parse_args()
 
-dsmz_taxa_file = args.dsmz_taxa
-mapped_taxa_file = args.mapped_taxa
+bacdive_taxid_file = args.bacdive_taxid
+taxonomy_file = args.taxonomy
 dsmz_habitat_file = args.dsmz_habitats
 mapped_habitat_file = args.mapped_habitats
 
@@ -29,27 +29,24 @@ for line in hf:
             habitat_dict[habitat] = {habitat_info}
 hf.close()
 
-taxa_dict = {}
-tf = open(mapped_taxa_file, "r")
-for line in tf:
+taxonomy = {}
+tax = open(taxonomy_file, "r")
+for num,line in enumerate(tax,1):
     line = line.rstrip()
-    p = re.compile(r'([^\t]+)\t(\S.+)')
-    m = p.match(line)
-    if(m):
-        taxon = m.group(1)
-        taxon_info = m.group(2)
-        taxa_dict[taxon] = taxon_info
-tf.close()
+    fields = line.split("\t")
+    taxid=fields[1]
+    if(not taxid in taxonomy):
+        taxonomy[taxid]={}
+        taxonomy[taxid]['name']=fields[2];
+        taxonomy[taxid]['path']=fields[3];
+tax.close()
 
 bacdiveTaxaIds = {}
-dtf = open(dsmz_taxa_file, "r")
+dtf = open(bacdive_taxid_file, "r")
 for num,line in enumerate(dtf,1):
-    if (num > 1):
-        line = line.rstrip()
-        fields = line.split("\t")
-        if(len(fields) == 4):
-            taxid = re.sub(r'\s+', ' ', fields[3]).strip()
-            bacdiveTaxaIds[fields[0]]=taxid;
+    line = line.rstrip()
+    bacdiveid,taxid = line.split("\t")
+    bacdiveTaxaIds[bacdiveid]=taxid;
 dtf.close()
 
 def add_entry(mappings, habitat, concepts, taxid, taxon, name, path, bacdiveid):
@@ -87,11 +84,12 @@ for num, line in enumerate(dhf, 1):
             habitat = re.sub(r'\s+', ' ', fields[3]).strip()
             if bacdiveid in bacdiveTaxaIds:
                 taxid = bacdiveTaxaIds[bacdiveid]
-                if taxid in taxa_dict:
-                    name, taxid2, path = taxa_dict[taxid].split("\t")
+                if taxid in taxonomy:
+                    name = taxonomy[taxid]['name']
+                    path = taxonomy[taxid]['path']
                     if habitat in habitat_dict:
                         concepts = habitat_dict[habitat]
-                        unique_mappings = add_entry(unique_mappings, habitat, concepts, taxid2, taxon, name, path, bacdiveid)
+                        unique_mappings = add_entry(unique_mappings, habitat, concepts, taxid, name, name, path, bacdiveid)
 dhf.close()
 
 for mapping in unique_mappings.values():